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About DrugSynq

Built by computational chemists who were tired of vendor lock-in.

Founded in 2021 in San Diego, DrugSynq exists because FEP-quality molecular simulation was priced as enterprise software — inaccessible to independent biotech teams and academic drug discovery groups doing exactly the work that needed it most.

DrugSynq team at whiteboard reviewing molecular simulation results in San Diego lab

Mission

Physics-based drug discovery for every medicinal chemistry team.

The established computational chemistry platforms — Schrödinger, OpenEye, BioLuminate — are seriously capable tools. They're also licensed for large pharma organizations with $1B+ R&D budgets. Meanwhile, the 100-person biotech with a promising kinase target and six months of runway makes synthesis decisions from docking scores and intuition, because FEP-quality predictions weren't financially accessible.

DrugSynq's mission is to close that gap: FEP binding affinity prediction and validated ADMET screening at a price point that works for a medicinal chemistry team of four. Not a simplified version — the same physics, at a scale designed for the programs that actually need it most.

DrugSynq is not a CRO. We do not run wet-lab assays, synthesize compounds, or provide clinical data. All outputs are computational predictions — they inform synthesis decisions but require experimental validation before any regulatory or clinical use.

Science-first approach
We publish our methods, validation data, and limitations. Transparency is a product feature.
Medicinal chemist-friendly
Output is designed for chemistry teams, not computational biology PhDs. Ranked list + ADMET flags — not raw simulation trajectories.
Bootstrapped and independent
We answer to our users, not to investors with different portfolio bets. DrugSynq is built to be here for the long run.

Origin Story

Started at the UCSD computational chemistry lab in 2021.

Dr. Maya Patel spent three years as a postdoctoral researcher at Schrödinger before joining UCSD as a faculty affiliate. The recurring conversation in every collaborator meeting: "We need FEP-quality predictions but can't afford the license." The workaround — run docking, hope for the best — produced hit rates no better than random for many target classes.

In early 2021, Dr. Patel recruited Ravi Krishnamurthy (computational infrastructure) and Sophie Chen (ADMET modeling) to build a production-grade FEP pipeline that could serve a growing lab without a $500K software contract. Two years of validation work later, DrugSynq opened external access in 2023.

2021
Founded in San Diego
Dr. Patel, Krishnamurthy, and Chen begin building DrugSynq FEP pipeline using open-source MD engine with custom automation layer.
2022–2023
Validation & ADMET Model Development
Two years of prospective benchmarking across 14 clinical targets. ADMET ensemble models trained on curated in vitro datasets. First peer-reviewed publications submitted.
2023 – present
External Access Opens
First external medicinal chemistry teams onboarded. Marcus Andersen joins as Head of Bioinformatics Infrastructure. Production API launched.

Values

How we build.

Transparent Uncertainty

Every prediction DrugSynq produces includes an error estimate. We will never present a ΔΔG value without its σ. Overconfident predictions are more dangerous than no prediction.

Published Evidence

Performance claims are backed by peer-reviewed papers. If we can't publish the validation methodology and pass peer review, we don't advertise the number. No marketing metrics.

Accessible by Design

Pricing, documentation, and onboarding are designed for teams who can't afford a three-month implementation project. You should be running your first campaign in under an hour.

Location

Torrey Pines, San Diego.

We're located in the Torrey Pines Science Park — the same neighborhood as Illumina, Sorrento Therapeutics, and dozens of biotech companies that are DrugSynq's natural neighbors and partners. The San Diego biotech ecosystem is where the work we care about happens.

10996 Torreyana Road, Suite 200
San Diego, CA 92121
Get in Touch
San Diego Biotech Neighborhood
Distance to UCSD 2.1 mi
Sorrento Valley biotech cluster 0.4 mi
Biotech companies within 5 mi 300+
Founded here 2021